Chromatin immunoprecipitation with exonuclease treatment (ChIP-exo) is a type ofchromatin immunoprecipitation开发人员为了增加mapping resolution of the targetDNAsequence where a protein binds, such as transcription factors.

Theexonucleasesare added after theantibody-coupled chromatin is precipitated in order to cleave the double-stranded DNA from the 5' ends until the bound protein, where they stop. In ChIP-exo two different exonucleases are used:Lambda exonuclease, which cleaves the DNA, andRecJ exonuclease, which eliminates single-strand background DNA.

Figure 1. Secondary structure of lambda (left) and RecJ (right) exonucleases.Lambda exonuclease presents one color per each subunit, and a small DNA molecule (in purple) to show where the reaction takes place.